Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.82■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv5-43A0A0B4J1J2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Igkv5-43A0A0B4J1J2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
Igkv5-43A0A0B4J1J2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms