Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm43530-201ENSMUST00000195920 274 ntBASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv12-2A0A0B4J1H1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv12-2A0A0B4J1H1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms