Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm7860-201ENSMUST00000121190 879 ntBASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv12-1A0A0B4J1H0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms