Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-52A0A0A6YXC3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm15039-201ENSMUST00000118914 875 ntBASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.63□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.62□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-52A0A0A6YXC3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms