Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbc1A0A0A6YWV4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbc1A0A0A6YWV4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbc1A0A0A6YWV4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbc1A0A0A6YWV4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbc1A0A0A6YWV4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbc1A0A0A6YWV4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbc1A0A0A6YWV4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbc1A0A0A6YWV4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbc1A0A0A6YWV4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms