Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv23A0A0A6YWQ1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.52■□□□□ 0.23
Trbv23A0A0A6YWQ1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv23A0A0A6YWQ1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv23A0A0A6YWQ1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv23A0A0A6YWQ1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 BC021767-201ENSMUST00000126387 1716 ntBASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv23A0A0A6YWQ1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm22238-201ENSMUST00000175222 88 ntBASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv23A0A0A6YWQ1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms