Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4n-4A0A075B615 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4n-4A0A075B615 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4n-4A0A075B615 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav4n-4A0A075B615 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4n-4A0A075B615 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4n-4A0A075B615 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms