Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-54A0A075B5W5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-54A0A075B5W5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-54A0A075B5W5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-54A0A075B5W5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-54A0A075B5W5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-54A0A075B5W5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-54A0A075B5W5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-54A0A075B5W5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-54A0A075B5W5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-54A0A075B5W5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-54A0A075B5W5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-54A0A075B5W5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-54A0A075B5W5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-54A0A075B5W5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.16■□□□□ 0.34
Ighv1-54A0A075B5W5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ighv1-54A0A075B5W5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms