Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd1Q9Z2E2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.72■□□□□ 0.75
Mbd1Q9Z2E2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Mbd1Q9Z2E2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd1Q9Z2E2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd1Q9Z2E2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mbd1Q9Z2E2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd1Q9Z2E2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms