Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phf1Q9Z1B8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Phf1Q9Z1B8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Phf1Q9Z1B8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Phf1Q9Z1B8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Phf1Q9Z1B8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.77■□□□□ 0.43
Phf1Q9Z1B8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Phf1Q9Z1B8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Phf1Q9Z1B8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phf1Q9Z1B8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phf1Q9Z1B8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Phf1Q9Z1B8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms