Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn3Q9Z0G9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn3Q9Z0G9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn3Q9Z0G9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn3Q9Z0G9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn3Q9Z0G9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn3Q9Z0G9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cldn3Q9Z0G9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cldn3Q9Z0G9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cldn3Q9Z0G9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn3Q9Z0G9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.54■□□□□ 0.72
Cldn3Q9Z0G9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cldn3Q9Z0G9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn3Q9Z0G9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cldn3Q9Z0G9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn3Q9Z0G9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn3Q9Z0G9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms