Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn8aQ9WTU3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn8aQ9WTU3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn8aQ9WTU3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn8aQ9WTU3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn8aQ9WTU3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn8aQ9WTU3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn8aQ9WTU3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn8aQ9WTU3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn8aQ9WTU3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn8aQ9WTU3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn8aQ9WTU3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn8aQ9WTU3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Gm13534-201ENSMUST00000121169 513 ntBASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn8aQ9WTU3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn8aQ9WTU3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn8aQ9WTU3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms