Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ggps1Q9WTN0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ggps1Q9WTN0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ggps1Q9WTN0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ggps1Q9WTN0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ggps1Q9WTN0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ggps1Q9WTN0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Gm6420-201ENSMUST00000193885 723 ntBASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ggps1Q9WTN0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ggps1Q9WTN0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.52■■□□□ 1.03
Ggps1Q9WTN0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ggps1Q9WTN0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Gm13534-201ENSMUST00000121169 513 ntBASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Nespas-201ENSMUST00000143738 1083 ntBASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Ggps1Q9WTN0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ggps1Q9WTN0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ggps1Q9WTN0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ggps1Q9WTN0 Gm6365-201ENSMUST00000054711 744 ntBASIC21.48■■□□□ 1.03
Ggps1Q9WTN0 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.48■■□□□ 1.03
Ggps1Q9WTN0 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.48■■□□□ 1.03
Ggps1Q9WTN0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.47■■□□□ 1.03
Ggps1Q9WTN0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Gm4968-201ENSMUST00000071458 858 ntBASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ggps1Q9WTN0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ggps1Q9WTN0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Ggps1Q9WTN0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ggps1Q9WTN0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ggps1Q9WTN0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ggps1Q9WTN0 Gm7860-201ENSMUST00000121190 879 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms