Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcf1Q9QZM3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcf1Q9QZM3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Clcf1Q9QZM3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.52■□□□□ 0.39
Clcf1Q9QZM3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clcf1Q9QZM3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Gm11421-201ENSMUST00000122124 294 ntBASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Gm5874-201ENSMUST00000096101 508 ntBASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcf1Q9QZM3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcf1Q9QZM3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clcf1Q9QZM3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcf1Q9QZM3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Gm10493-201ENSMUST00000097270 612 ntBASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcf1Q9QZM3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Clcf1Q9QZM3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcf1Q9QZM3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms