Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm11421-201ENSMUST00000122124 294 ntBASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Shroom3Q9QXN0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom3Q9QXN0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom3Q9QXN0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shroom3Q9QXN0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom3Q9QXN0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom3Q9QXN0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
Shroom3Q9QXN0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom3Q9QXN0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom3Q9QXN0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.39■□□□□ 0.7
Shroom3Q9QXN0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms