Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr4Q9QUK6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr4Q9QUK6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr4Q9QUK6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr4Q9QUK6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.01■□□□□ 0.63
Tlr4Q9QUK6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tlr4Q9QUK6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tlr4Q9QUK6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Gm29257-201ENSMUST00000186115 639 ntBASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Gm37179-201ENSMUST00000194862 823 ntBASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr4Q9QUK6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr4Q9QUK6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr4Q9QUK6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Reep4-203ENSMUST00000226563 1444 ntBASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr4Q9QUK6 Gm13234-201ENSMUST00000120010 747 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms