Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tubb3Q9ERD7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Tubb3Q9ERD7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubb3Q9ERD7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Tubb3Q9ERD7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.21■□□□□ 0.67
Tubb3Q9ERD7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Tubb3Q9ERD7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubb3Q9ERD7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tubb3Q9ERD7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tubb3Q9ERD7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubb3Q9ERD7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubb3Q9ERD7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubb3Q9ERD7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tubb3Q9ERD7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubb3Q9ERD7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubb3Q9ERD7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.14■□□□□ 0.66
Tubb3Q9ERD7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tubb3Q9ERD7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tubb3Q9ERD7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms