Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr9Q9EQU3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.23■□□□□ 0.83
Tlr9Q9EQU3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr9Q9EQU3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr9Q9EQU3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr9Q9EQU3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr9Q9EQU3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr9Q9EQU3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Mir6236-201ENSMUST00000184437 123 ntBASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr9Q9EQU3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr9Q9EQU3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr9Q9EQU3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tlr9Q9EQU3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tlr9Q9EQU3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Tlr9Q9EQU3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.16■□□□□ 0.82
Tlr9Q9EQU3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tlr9Q9EQU3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms