Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nif3l1Q9EQ80 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nif3l1Q9EQ80 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Gm40848-201ENSMUST00000221998 324 ntBASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nif3l1Q9EQ80 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nif3l1Q9EQ80 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nif3l1Q9EQ80 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nif3l1Q9EQ80 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nif3l1Q9EQ80 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nif3l1Q9EQ80 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nif3l1Q9EQ80 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms