Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa5Q9D7I0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shisa5Q9D7I0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Shisa5Q9D7I0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa5Q9D7I0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.58■□□□□ 0.41
Shisa5Q9D7I0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa5Q9D7I0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa5Q9D7I0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa5Q9D7I0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa5Q9D7I0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Shisa5Q9D7I0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Gm18284-201ENSMUST00000172604 624 ntBASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa5Q9D7I0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa5Q9D7I0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa5Q9D7I0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa5Q9D7I0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Gm26833-201ENSMUST00000180899 440 ntBASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa5Q9D7I0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa5Q9D7I0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa5Q9D7I0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa5Q9D7I0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms