Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Gm12821-201ENSMUST00000120022 600 ntBASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Gm45417-201ENSMUST00000209533 758 ntBASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Gm6139-201ENSMUST00000079261 882 ntBASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf225Q9D7D1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Smad6-203ENSMUST00000179458 273 ntBASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rnf225Q9D7D1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf225Q9D7D1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf225Q9D7D1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.33■□□□□ 0.84
Rnf225Q9D7D1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf225Q9D7D1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf225Q9D7D1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf225Q9D7D1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 Gm8493-201ENSMUST00000196881 489 ntBASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rnf225Q9D7D1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf225Q9D7D1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf225Q9D7D1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf225Q9D7D1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Gm19891-201ENSMUST00000189771 303 ntBASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf225Q9D7D1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Rnf225Q9D7D1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf225Q9D7D1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf225Q9D7D1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms