Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Upk3bl1Q9D701 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bl1Q9D701 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bl1Q9D701 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bl1Q9D701 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bl1Q9D701 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Upk3bl1Q9D701 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Gm27502-201ENSMUST00000183495 199 ntBASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.57■□□□□ 0.4
Upk3bl1Q9D701 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bl1Q9D701 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Upk3bl1Q9D701 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bl1Q9D701 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Gm14523-201ENSMUST00000117260 558 ntBASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bl1Q9D701 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bl1Q9D701 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms