Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.21■□□□□ 0.99
Cfap53Q9D439 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cfap53Q9D439 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap53Q9D439 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap53Q9D439 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap53Q9D439 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Cfap53Q9D439 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap53Q9D439 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Gm12251-201ENSMUST00000117893 792 ntBASIC21.2■□□□□ 0.98
Cfap53Q9D439 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap53Q9D439 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.19■□□□□ 0.98
Cfap53Q9D439 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cfap53Q9D439 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap53Q9D439 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Gm8493-201ENSMUST00000196881 489 ntBASIC21.17■□□□□ 0.98
Cfap53Q9D439 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.17■□□□□ 0.98
Cfap53Q9D439 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.17■□□□□ 0.98
Cfap53Q9D439 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap53Q9D439 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.16■□□□□ 0.98
Cfap53Q9D439 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.16■□□□□ 0.98
Cfap53Q9D439 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap53Q9D439 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Gm45417-201ENSMUST00000209533 758 ntBASIC21.15■□□□□ 0.98
Cfap53Q9D439 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap53Q9D439 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap53Q9D439 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap53Q9D439 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap53Q9D439 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.13■□□□□ 0.97
Cfap53Q9D439 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.13■□□□□ 0.97
Cfap53Q9D439 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.12■□□□□ 0.97
Cfap53Q9D439 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Serp2-204ENSMUST00000228055 705 ntBASIC21.12■□□□□ 0.97
Cfap53Q9D439 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap53Q9D439 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cfap53Q9D439 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms