Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift27Q9D0P8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.67■□□□□ 0.42
Ift27Q9D0P8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift27Q9D0P8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift27Q9D0P8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift27Q9D0P8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift27Q9D0P8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.42
Ift27Q9D0P8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ift27Q9D0P8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ift27Q9D0P8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ift27Q9D0P8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift27Q9D0P8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift27Q9D0P8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift27Q9D0P8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.61■□□□□ 0.41
Ift27Q9D0P8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.61■□□□□ 0.41
Ift27Q9D0P8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift27Q9D0P8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift27Q9D0P8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Gm10420-201ENSMUST00000121713 882 ntBASIC17.59■□□□□ 0.41
Ift27Q9D0P8 Mir6236-201ENSMUST00000184437 123 ntBASIC17.59■□□□□ 0.41
Ift27Q9D0P8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 1003.3 ms