Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Gm6345-202ENSMUST00000180900 204 ntBASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lysmd1Q9D0E3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Gm13559-201ENSMUST00000120476 863 ntBASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Gm13158-201ENSMUST00000122007 736 ntBASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lysmd1Q9D0E3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Gm14859-201ENSMUST00000117752 357 ntBASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lysmd1Q9D0E3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Gm7889-201ENSMUST00000185591 958 ntBASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd1Q9D0E3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Gm17971-201ENSMUST00000190239 806 ntBASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lysmd1Q9D0E3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd1Q9D0E3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Gm10013-201ENSMUST00000106074 672 ntBASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 AA414768-201ENSMUST00000121924 1257 ntBASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lysmd1Q9D0E3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Gm11539-201ENSMUST00000119837 557 ntBASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Gm13436-201ENSMUST00000120418 567 ntBASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Gm44549-201ENSMUST00000208351 577 ntBASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lysmd1Q9D0E3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd1Q9D0E3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd1Q9D0E3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms