Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Gm8495-201ENSMUST00000188740 694 ntBASIC20.7■□□□□ 0.9
Mms19Q9D071 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.7■□□□□ 0.9
Mms19Q9D071 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.69■□□□□ 0.9
Mms19Q9D071 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.69■□□□□ 0.9
Mms19Q9D071 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mms19Q9D071 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mms19Q9D071 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.68■□□□□ 0.9
Mms19Q9D071 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mms19Q9D071 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mms19Q9D071 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Mms19Q9D071 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mms19Q9D071 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.68■□□□□ 0.9
Mms19Q9D071 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mms19Q9D071 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.68■□□□□ 0.9
Mms19Q9D071 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Mms19Q9D071 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Mms19Q9D071 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Mms19Q9D071 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Mms19Q9D071 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mms19Q9D071 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Mms19Q9D071 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mms19Q9D071 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mms19Q9D071 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mms19Q9D071 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mms19Q9D071 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mms19Q9D071 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mms19Q9D071 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.65■□□□□ 0.9
Mms19Q9D071 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mms19Q9D071 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.65■□□□□ 0.9
Mms19Q9D071 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mms19Q9D071 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mms19Q9D071 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mms19Q9D071 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.64■□□□□ 0.89
Mms19Q9D071 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.64■□□□□ 0.89
Mms19Q9D071 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.64■□□□□ 0.89
Mms19Q9D071 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mms19Q9D071 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Mms19Q9D071 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mms19Q9D071 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mms19Q9D071 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.64■□□□□ 0.89
Mms19Q9D071 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Mms19Q9D071 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.63■□□□□ 0.89
Mms19Q9D071 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Gm10493-201ENSMUST00000097270 612 ntBASIC20.63■□□□□ 0.89
Mms19Q9D071 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mms19Q9D071 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mms19Q9D071 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Mms19Q9D071 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.62■□□□□ 0.89
Mms19Q9D071 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.62■□□□□ 0.89
Mms19Q9D071 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.62■□□□□ 0.89
Mms19Q9D071 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Gm5874-201ENSMUST00000096101 508 ntBASIC20.62■□□□□ 0.89
Mms19Q9D071 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mms19Q9D071 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.62■□□□□ 0.89
Mms19Q9D071 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mms19Q9D071 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mms19Q9D071 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms