Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Gm27801-201ENSMUST00000184174 223 ntBASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssbp3Q9D032 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Ssbp3Q9D032 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ssbp3Q9D032 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.08■□□□□ 0.16
Ssbp3Q9D032 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.07■□□□□ 0.16
Ssbp3Q9D032 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssbp3Q9D032 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssbp3Q9D032 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Gm42778-201ENSMUST00000199644 553 ntBASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Gm42642-201ENSMUST00000200683 355 ntBASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.04■□□□□ 0.16
Ssbp3Q9D032 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 AA386476-201ENSMUST00000098781 1665 ntBASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Golph3-202ENSMUST00000226517 2359 ntBASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssbp3Q9D032 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Gm18671-201ENSMUST00000214826 683 ntBASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssbp3Q9D032 Gm9988-201ENSMUST00000069786 435 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms