Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd2Q9CZB3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd2Q9CZB3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Thumpd2Q9CZB3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Thumpd2Q9CZB3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Thumpd2Q9CZB3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.27■□□□□ 0.83
Thumpd2Q9CZB3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd2Q9CZB3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd2Q9CZB3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.24■□□□□ 0.83
Thumpd2Q9CZB3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd2Q9CZB3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd2Q9CZB3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd2Q9CZB3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms