Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mrpl55Q9CZ83 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mrpl55Q9CZ83 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Gm32051-202ENSMUST00000197905 2385 ntBASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mrpl55Q9CZ83 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms