Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Ssr1Q9CY50 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.89■□□□□ 0.94
Ssr1Q9CY50 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ssr1Q9CY50 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
Ssr1Q9CY50 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Gm45102-201ENSMUST00000207427 857 ntBASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Ssr1Q9CY50 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr1Q9CY50 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr1Q9CY50 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr1Q9CY50 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr1Q9CY50 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ssr1Q9CY50 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr1Q9CY50 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssr1Q9CY50 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssr1Q9CY50 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssr1Q9CY50 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr1Q9CY50 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr1Q9CY50 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.8■□□□□ 0.92
Ssr1Q9CY50 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ssr1Q9CY50 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr1Q9CY50 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr1Q9CY50 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr1Q9CY50 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms