Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.21■□□□□ 0.67
Lrrc40Q9CRC8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc40Q9CRC8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
Lrrc40Q9CRC8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc40Q9CRC8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc40Q9CRC8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc40Q9CRC8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Lrrc40Q9CRC8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lrrc40Q9CRC8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lrrc40Q9CRC8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc40Q9CRC8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms