Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msantd3Q9CR78 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msantd3Q9CR78 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msantd3Q9CR78 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.54■□□□□ 0.56
Msantd3Q9CR78 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msantd3Q9CR78 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msantd3Q9CR78 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msantd3Q9CR78 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msantd3Q9CR78 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msantd3Q9CR78 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Gm4968-201ENSMUST00000071458 858 ntBASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msantd3Q9CR78 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms