Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61bQ9CQS8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61bQ9CQS8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61bQ9CQS8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61bQ9CQS8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61bQ9CQS8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61bQ9CQS8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Mir5133-201ENSMUST00000174955 77 ntBASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.36□□□□□ -0.75
Sec61bQ9CQS8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61bQ9CQS8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61bQ9CQS8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms