Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim8Q99PJ2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Etf1-202ENSMUST00000180351 108 ntBASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim8Q99PJ2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim8Q99PJ2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim8Q99PJ2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trim8Q99PJ2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim8Q99PJ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Trim8Q99PJ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim8Q99PJ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim8Q99PJ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim8Q99PJ2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Trim8Q99PJ2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim8Q99PJ2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim8Q99PJ2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim8Q99PJ2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms