Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.17■□□□□ 0.66
Clcc1Q99LI2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcc1Q99LI2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcc1Q99LI2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clcc1Q99LI2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcc1Q99LI2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcc1Q99LI2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Clcc1Q99LI2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcc1Q99LI2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcc1Q99LI2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcc1Q99LI2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcc1Q99LI2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcc1Q99LI2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms