Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk9Q99J95 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Cdk9Q99J95 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cdk9Q99J95 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.43■□□□□ 0.7
Cdk9Q99J95 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.43■□□□□ 0.7
Cdk9Q99J95 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdk9Q99J95 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.43■□□□□ 0.7
Cdk9Q99J95 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk9Q99J95 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk9Q99J95 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cdk9Q99J95 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Cdk9Q99J95 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.4■□□□□ 0.7
Cdk9Q99J95 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.4■□□□□ 0.7
Cdk9Q99J95 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk9Q99J95 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdk9Q99J95 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdk9Q99J95 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdk9Q99J95 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdk9Q99J95 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.39■□□□□ 0.69
Cdk9Q99J95 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.39■□□□□ 0.69
Cdk9Q99J95 Gm7143-201ENSMUST00000222811 859 ntBASIC19.39■□□□□ 0.69
Cdk9Q99J95 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk9Q99J95 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.38■□□□□ 0.69
Cdk9Q99J95 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Gm10232-201ENSMUST00000089221 720 ntBASIC19.38■□□□□ 0.69
Cdk9Q99J95 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk9Q99J95 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms