Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Rfc4Q99J62 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rfc4Q99J62 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.39■■□□□ 1.18
Rfc4Q99J62 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.39■■□□□ 1.17
Rfc4Q99J62 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rfc4Q99J62 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc4Q99J62 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.38■■□□□ 1.17
Rfc4Q99J62 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Gm10252-201ENSMUST00000209541 832 ntBASIC22.37■■□□□ 1.17
Rfc4Q99J62 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc4Q99J62 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Gm13534-201ENSMUST00000121169 513 ntBASIC22.36■■□□□ 1.17
Rfc4Q99J62 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc4Q99J62 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Gm6211-202ENSMUST00000167849 925 ntBASIC22.35■■□□□ 1.17
Rfc4Q99J62 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Gm20049-201ENSMUST00000219950 730 ntBASIC22.35■■□□□ 1.17
Rfc4Q99J62 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc4Q99J62 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc4Q99J62 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rfc4Q99J62 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Gm13168-201ENSMUST00000121771 632 ntBASIC22.33■■□□□ 1.17
Rfc4Q99J62 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc4Q99J62 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Rfc4Q99J62 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Rfc4Q99J62 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.32■■□□□ 1.16
Rfc4Q99J62 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfc4Q99J62 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.31■■□□□ 1.16
Rfc4Q99J62 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rfc4Q99J62 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.31■■□□□ 1.16
Rfc4Q99J62 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfc4Q99J62 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms