Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Etf1-202ENSMUST00000180351 108 ntBASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd1Q99J36 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 BC021767-201ENSMUST00000126387 1716 ntBASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Thumpd1Q99J36 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd1Q99J36 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd1Q99J36 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Thumpd1Q99J36 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd1Q99J36 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Thumpd1Q99J36 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms