Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp1aQ921W0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp1aQ921W0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp1aQ921W0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp1aQ921W0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Chmp1aQ921W0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Chmp1aQ921W0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp1aQ921W0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17■□□□□ 0.31
Chmp1aQ921W0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Chmp1aQ921W0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp1aQ921W0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Chmp1aQ921W0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms