Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha11Q91Y19 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha11Q91Y19 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha11Q91Y19 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha11Q91Y19 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Gm42778-201ENSMUST00000199644 553 ntBASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Gm42642-201ENSMUST00000200683 355 ntBASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha11Q91Y19 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha11Q91Y19 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha11Q91Y19 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Pcdha11Q91Y19 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha11Q91Y19 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha11Q91Y19 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha11Q91Y19 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha11Q91Y19 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha11Q91Y19 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Gm18671-201ENSMUST00000214826 683 ntBASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha11Q91Y19 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha11Q91Y19 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha11Q91Y19 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 156.4 ms