Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha2Q91Y17 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdha2Q91Y17 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha2Q91Y17 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha2Q91Y17 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha2Q91Y17 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Gm10493-201ENSMUST00000097270 612 ntBASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha2Q91Y17 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Gm18284-201ENSMUST00000172604 624 ntBASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha2Q91Y17 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha2Q91Y17 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdha2Q91Y17 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdha2Q91Y17 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdha2Q91Y17 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Golph3-202ENSMUST00000226517 2359 ntBASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha2Q91Y17 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha2Q91Y17 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha2Q91Y17 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms