Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhac1Q91Y10 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhac1Q91Y10 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhac1Q91Y10 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhac1Q91Y10 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhac1Q91Y10 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhac1Q91Y10 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhac1Q91Y10 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhac1Q91Y10 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.02■□□□□ 0.48
Pcdhac1Q91Y10 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhac1Q91Y10 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdhac1Q91Y10 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhac1Q91Y10 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Gm43034-201ENSMUST00000198678 1364 ntBASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhac1Q91Y10 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhac1Q91Y10 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhac1Q91Y10 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhac1Q91Y10 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhac1Q91Y10 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms