Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb1Q91Y08 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb1Q91Y08 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Gm8493-201ENSMUST00000196881 489 ntBASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb1Q91Y08 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Gm43173-201ENSMUST00000202246 593 ntBASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb1Q91Y08 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Smad6-203ENSMUST00000179458 273 ntBASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb1Q91Y08 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb1Q91Y08 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb1Q91Y08 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Gm45417-201ENSMUST00000209533 758 ntBASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Gm6139-201ENSMUST00000079261 882 ntBASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb1Q91Y08 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb1Q91Y08 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb1Q91Y08 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Gm11421-201ENSMUST00000122124 294 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms