Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb4Q91XZ6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb4Q91XZ6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb4Q91XZ6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb4Q91XZ6 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.14■□□□□ 0.66
Pcdhb4Q91XZ6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb4Q91XZ6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb4Q91XZ6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb4Q91XZ6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb4Q91XZ6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb4Q91XZ6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb4Q91XZ6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb4Q91XZ6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb4Q91XZ6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb4Q91XZ6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gm9847-201ENSMUST00000052528 599 ntBASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms