Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Gm4968-201ENSMUST00000071458 858 ntBASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb5Q91XZ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Gm7290-201ENSMUST00000104990 617 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Gm12918-201ENSMUST00000120234 636 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Gm15710-201ENSMUST00000121821 636 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Gm5075-201ENSMUST00000196916 622 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.94■■□□□ 1.26
Pcdhb5Q91XZ5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Nespas-201ENSMUST00000143738 1083 ntBASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb5Q91XZ5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
Pcdhb5Q91XZ5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Gm13148-201ENSMUST00000118892 745 ntBASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb5Q91XZ5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb5Q91XZ5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhb5Q91XZ5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhb5Q91XZ5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Pcdhb5Q91XZ5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.89■■□□□ 1.25
Pcdhb5Q91XZ5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhb5Q91XZ5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb5Q91XZ5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb5Q91XZ5 Gm7860-201ENSMUST00000121190 879 ntBASIC22.86■■□□□ 1.25
Pcdhb5Q91XZ5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.86■■□□□ 1.25
Pcdhb5Q91XZ5 Gm10653-202ENSMUST00000139570 835 ntBASIC22.86■■□□□ 1.25
Pcdhb5Q91XZ5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms