Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhb8Q91XZ2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb8Q91XZ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb8Q91XZ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb8Q91XZ2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb8Q91XZ2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Spcs1-204ENSMUST00000226782 949 ntBASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb8Q91XZ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb8Q91XZ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb8Q91XZ2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb8Q91XZ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb8Q91XZ2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb8Q91XZ2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb8Q91XZ2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.83■□□□□ 0.6
Pcdhb8Q91XZ2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb8Q91XZ2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb8Q91XZ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Serp2-204ENSMUST00000228055 705 ntBASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb8Q91XZ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb8Q91XZ2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb8Q91XZ2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb8Q91XZ2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb8Q91XZ2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb8Q91XZ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb8Q91XZ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb8Q91XZ2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms