Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga6Q91XY2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga6Q91XY2 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga6Q91XY2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga6Q91XY2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga6Q91XY2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga6Q91XY2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Gm10812-201ENSMUST00000099864 546 ntBASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga6Q91XY2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga6Q91XY2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga6Q91XY2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms