Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps36Q91XD6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps36Q91XD6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps36Q91XD6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps36Q91XD6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps36Q91XD6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.87■□□□□ 0.93
Vps36Q91XD6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps36Q91XD6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.86■□□□□ 0.93
Vps36Q91XD6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.86■□□□□ 0.93
Vps36Q91XD6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps36Q91XD6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps36Q91XD6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps36Q91XD6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps36Q91XD6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps36Q91XD6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps36Q91XD6 Serp2-204ENSMUST00000228055 705 ntBASIC20.84■□□□□ 0.93
Vps36Q91XD6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Vps36Q91XD6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vps36Q91XD6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Vps36Q91XD6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps36Q91XD6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps36Q91XD6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps36Q91XD6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps36Q91XD6 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.82■□□□□ 0.92
Vps36Q91XD6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Vps36Q91XD6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps36Q91XD6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vps36Q91XD6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps36Q91XD6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps36Q91XD6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps36Q91XD6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.81■□□□□ 0.92
Vps36Q91XD6 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.81■□□□□ 0.92
Vps36Q91XD6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps36Q91XD6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.81■□□□□ 0.92
Vps36Q91XD6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps36Q91XD6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.8■□□□□ 0.92
Vps36Q91XD6 Gm21956-201ENSMUST00000179946 522 ntBASIC20.8■□□□□ 0.92
Vps36Q91XD6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps36Q91XD6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps36Q91XD6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps36Q91XD6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms