Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx9Q91VH2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx9Q91VH2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.35■□□□□ 0.85
Snx9Q91VH2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.35■□□□□ 0.85
Snx9Q91VH2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snx9Q91VH2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
Snx9Q91VH2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Snx9Q91VH2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Snx9Q91VH2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Snx9Q91VH2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx9Q91VH2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.34■□□□□ 0.85
Snx9Q91VH2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.33■□□□□ 0.85
Snx9Q91VH2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx9Q91VH2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snx9Q91VH2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snx9Q91VH2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snx9Q91VH2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.32■□□□□ 0.84
Snx9Q91VH2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Snx9Q91VH2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx9Q91VH2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.31■□□□□ 0.84
Snx9Q91VH2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx9Q91VH2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx9Q91VH2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
Snx9Q91VH2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snx9Q91VH2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snx9Q91VH2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snx9Q91VH2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Snx9Q91VH2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Snx9Q91VH2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms