Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vsx1Q91V10 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Vsx1Q91V10 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vsx1Q91V10 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.18■□□□□ 0.66
Vsx1Q91V10 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vsx1Q91V10 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.18■□□□□ 0.66
Vsx1Q91V10 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm7290-201ENSMUST00000104990 617 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm12918-201ENSMUST00000120234 636 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm15710-201ENSMUST00000121821 636 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm5075-201ENSMUST00000196916 622 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.17■□□□□ 0.66
Vsx1Q91V10 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vsx1Q91V10 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.16■□□□□ 0.66
Vsx1Q91V10 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vsx1Q91V10 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Gm13146-201ENSMUST00000118508 780 ntBASIC19.15■□□□□ 0.66
Vsx1Q91V10 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vsx1Q91V10 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vsx1Q91V10 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vsx1Q91V10 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.12■□□□□ 0.65
Vsx1Q91V10 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vsx1Q91V10 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Gm6420-201ENSMUST00000193885 723 ntBASIC19.11■□□□□ 0.65
Vsx1Q91V10 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms